Package: TFMPvalue
Version: 1.0.0
Date: 2026-01-18
Title: Efficient and Accurate P-Value Computation for Position Weight
        Matrices
Description: In putative Transcription Factor Binding Sites (TFBSs)
        identification from sequence/alignments, we are interested in
        the significance of certain match score. TFMPvalue provides the
        accurate calculation of P-value with score threshold for
        Position Weight Matrices, or the score with given P-value. It
        is an interface to code originally made available by Helene
        Touzet and Jean-Stephane Varre, 2007, Algorithms Mol Biol:2,
        15. <doi:10.1186/1748-7188-2-15>.
Authors@R: person(given = "Ge",
                  family = "Tan",
                  role = c("aut", "cre"),
                  email = "ge_tan@live.com")
Copyright: 2007 LIFL-USTL-INRIA
Imports: Rcpp(>= 0.11.1)
Depends: R (>= 4.5.0)
Suggests: testthat
LinkingTo: Rcpp
License: GPL-2
URL: https://github.com/ge11232002/TFMPvalue
BugReports: https://github.com/ge11232002/TFMPvalue/issues
Type: Package
NeedsCompilation: yes
Collate: TFMPvalue-sc2pv.R TFMPvalue-pv2sc.R TFMPvalue-lazyScore.R
        util.R
Repository: https://ge11232002.r-universe.dev
Date/Publication: 2026-01-18 18:33:08 UTC
RemoteUrl: https://github.com/ge11232002/tfmpvalue
RemoteRef: HEAD
RemoteSha: ddc1173d1e2afe8106da52f15bfd925d143e141c
Packaged: 2026-09-16 07:08:22 UTC; root
Author: Ge Tan [aut, cre]
Maintainer: Ge Tan <ge_tan@live.com>